Publications

Publications authored with Clifford Shaffer

New! Quasi-Newton Stochastic Optimization Algorithm for Parameter Estimation of a Stochastic Model of the Budding Yeast Cell Cycle

Minghan Chen, Layne T. Watson, Clifford Shaffer
In IEEE/ACM Transactions on Computational Biology and Bioinformatics, 16 1: 301-311, 11/2017
Citatations: BibTeX

New! Auto-Grading Jupyter Notebooks

Amit Naik, Clifford Shaffer, Chris North
In Proceedings of the ACM Technical Symposium on Computer Science Education, (pp 1139-1144), 02/2020
Citatations: BibTeX

A Framework to Analyze the Performance of Load Balancing Schemes for Ensembles of Stochastic Simulations

Layne T. Watson, Clifford Shaffer, Yang Cao
In International Journal of Parallel Programming, 43 4: 597-630, 08/2015
Citatations: BibTeX

JigCell Run Manager (JC-RM): a tool for managing large sets of biochemical model parametrizations

Layne T. Watson, Clifford Shaffer
In BMC Systems Biology, 9 : 95,
Citatations: BibTeX

Integrated Computing Environments for Watershed Management

Layne T. Watson, Vinod K. Lohani, David F. Kibler, Randel L. Dymond, Naren Ramakrishnan, Clifford Shaffer
In Computer, 16 4: 259--268, 10/2002
Citatations: BibTeX